genewise output
Score 288.56 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000650_2.0    1 MAEYSQTGILTALLLFTVVTVKDIYVGRNS------VTQQENTGPDINT 
                     MAE+SQT +L ALLLF+ +TV+DIY+G +S       +   N  PDI T 
                     MAEFSQTSLLAALLLFSALTVRDIYLGSSSSQRGYQPSDNPNVSPDIKT 
OMLM01010512.1: 7482 aggtacaactggcccttgcagcgatcgatatccgtccagacagtcgaaa 
                     tcatgacgttccttttcctctgatatggcgcaggaacgaacatccatac 
                     gggccggccggtgcgtggcgcgcttcccgtggcacagcctccccgcagt 


SPP00000650_2.0   44 QRQNKHTFYTGPVLKFQY                          ISXGY 
                      +  K ++YTGPVLKFQY                          ISXGY 
                     GKPAKSSLYTGPVLKFQY           C:C[tgt]       ISXGY 
OMLM01010512.1: 7629 gacgattctagcgcatctTGGTGAGTG  Intron 1   CAGTattgt 
                     gaccacctacgcttataa  <2-----[7685 :10878]-2> tcgga 
                     aagcggtgtagcgggcgc                          tcaac 


SPP00000650_2.0   68 SKVFQEYSRSISQLYPDIRIEGDNYPPKPIN                   
                     SKVFQEY+R+ISQLYPD+ IEG+NYPP P+N                   
                     SKVFQEYARAISQLYPDLHIEGENYPPTPFN                   
OMLM01010512.1:10895 aagtcgtgcgaacctcgccagggatccacta                   
                     gattaaacgctgatacatatagaaaccccta                   
                     cagcggctacccggcgccctgggcccccccc                   


SPP00000650_2.0   99                           YLGNFLSYFKLLAIALIVTGQNP 
                                                 GN++SY+KLLAI LIV+GQNP 
                                K:R[agg]       CAGNLISYLKLLAILLIVSGQNP 
OMLM01010512.1:10988 AGGTGAGTC  Intron 2   CAGGtggacattcaccgaccagagcac 
                       <2-----[10990:11079]-2> gcgattcatattctttttggaac 
                                               tatcacccggccccgccttggtc 


SPP00000650_2.0  123 FQMFGMNTPRIWAWGQENK                       IFSCLMA 
                     F ++G++TPR W W Q+NK                       IFSCLMA 
                     FVLLGLHTPRAWTWTQDNK                       IFSCLMA 
OMLM01010512.1:11150 tgccgccacagtatacgaaGTACCTG  Intron 3   CAGatttcag 
                     ttttgtaccgcgcgcaaaa<0-----[11207:11286]-0>ttcgttc 
                     ccctctctcacgcgcgccg                       ctctcgc 


SPP00000650_2.0  149 FFISNMLETHFLSTGAFEITLN                          I 
                     FF+ NM+ETHFLSTGAFEITLN                          + 
                     FFLCNMMETHFLSTGAFEITLN          D:E[gaa]        V 
OMLM01010512.1:11308 ttctaaagactctaggtgaacaGGTGAGTC  Intron 4   CAGAAg 
                     tttgattacattccgctatcta <1-----[11375:11455]-1>  t 
                     cccccgggttcgctaccgctac                          c 


SPP00000650_2.0  173 PIWSKLQSGYVPNIQELFQILDNHLKMNQADKMNF               
                     P+WSKLQSGYVPNIQE+FQILD+H+K+NQ D + F               
                     PLWSKLQSGYVPNIQEIFQILDSHMKLNQVDHVTF               
OMLM01010512.1:11461 ctttacctgtgcaacgatcacgacaacacggcgat               
                     ctgcatacgatcataattattagatataataatct               
                     tggcgtattttgccggttgctcccgggcggccgcc               


//
Making a C in phase 2 intron
Making a R in phase 2 intron
Making a E in phase 1 intron
>OMLM01010512.1:subseq(0,13409).pep
MAEFSQTSLLAALLLFSALTVRDIYLGSSSSQRGYQPSDNPNVSPDIKTGKPAKSSLYTG
PVLKFQYCISXGYSKVFQEYARAISQLYPDLHIEGENYPPTPFNRCAGNLISYLKLLAIL
LIVSGQNPFVLLGLHTPRAWTWTQDNKIFSCLMAFFLCNMMETHFLSTGAFEITLNEVPL
WSKLQSGYVPNIQEIFQILDSHMKLNQVDHVTF
//
>OMLM01010512.1:subseq(0,13409).[7482:11565].sp
ATGGCGGAGTTCAGCCAGACGAGCCTCTTGGCGGCTCTGCTCCTGTTTTCGGCGCTCACG
GTCCGGGACATTTATCTCGGCAGCTCGAGTTCGCAGCGCGGATACCAACCGAGCGACAAT
CCCAACGTCTCCCCGGACATAAAGACTGGAAAACCGGCCAAGTCGTCTCTGTATACAGGG
CCCGTGCTGAAGTTCCAGTACTGTATTTCCTGAGGATACAGCAAAGTGTTCCAGGAGTAC
GCTCGAGCCATCAGCCAGCTGTACCCGGACCTCCACATTGAGGGGGAGAACTACCCCCCC
ACCCCCTTCAACAGGTGTGCAGGTAACCTAATCTCCTACCTGAAGCTCCTCGCCATCCTG
CTCATCGTTAGTGGGCAGAATCCCTTCGTCCTCCTTGGCCTTCACACTCCCAGAGCCTGG
ACCTGGACCCAGGACAACAAGATCTTTTCCTGTCTCATGGCCTTCTTCCTCTGCAACATG
ATGGAGACTCATTTCCTGTCCACTGGAGCCTTCGAGATCACTCTAAACGAAGTCCCTTTG
TGGTCCAAGCTTCAATCTGGTTATGTTCCGAACATCCAGGAGATTTTTCAGATCCTTGAC
AGCCACATGAAGCTGAACCAGGTGGACCACGTGACCTTC
//
OMLM01010512.1:subseq(0,13409)	GeneWise	match	7482	11565	293.55	+	.	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	cds	7482	7684	0.00	+	0	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	intron	7685	10878	0.00	+	.	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	cds	10879	10989	0.00	+	1	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	intron	10990	11079	0.00	+	.	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	cds	11080	11206	0.00	+	1	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	intron	11207	11286	0.00	+	.	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	cds	11287	11374	0.00	+	0	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	intron	11375	11455	0.00	+	.	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
OMLM01010512.1:subseq(0,13409)	GeneWise	cds	11456	11565	0.00	+	2	OMLM01010512.1:subseq(0,13409)-genewise-prediction-1
//